Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_2440179_2440378_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2440179 - 2440378

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTGG

5'SS Class:

major

3'SS Sequence:

CTCTCCTCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

GCTCCCCTAACT

Flanking Amino Acid:

GFSHSCSMSQNFDMFISHYS

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

63.5

43.2

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

0.63

0.7

72.5

25.8

Minor 5ss

-0.9

2.4

50.4

45.9

Minor BPS

64.6

0.54

1.7

79.42

Associated Gene:

Gene:

DPP9

Ensembl Gene ID:

ENSAPLG00000013927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043022

2434943 - 2455123

20181

ENSAPLT00000014562

2435480 - 2455123

19644