About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_2442392_2443118_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2442392 - 2443118

Intron Length:
727

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTAAGAGGC

5'SS Class:
major

3'SS Sequence:
CCTTGTGTGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTCAT

U12 Branch Point Sequence:
CCTTGTGTGACA

Flanking Amino Acid:
YEETTDVWINVHDIFYPFIQ

Intron Amino Acid Position:
451

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1.1
66.3
38

Major BPS
74.8
0.62
0.9
75.3
29.7

Major PPT
68.3
0.41
1.1
63.5
41.8

Minor 5ss
33.2
-1.9
3.5
46.3
42.4

Minor BPS
44.4
-0.4
2.4
56.99
43.4

Associated Gene:

Gene:
DPP9

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2434943 - 2455123
20181

2435480 - 2455123
19644