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Intron Name: Anas_platyrhynchos_platyrhynchos_29_244445_245377_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
244445 - 245377

Intron Length:
933

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATGCAG

5'SS Class:
major

3'SS Sequence:
GACTCTTTTCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTAAT

U12 Branch Point Sequence:
TAAGCATTAATC

Flanking Amino Acid:
GFLYITGRIKELIITAGGEN

Intron Amino Acid Position:
571

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.1
0.64
1.1
62.4
43.6

Major BPS
79.4
0.73
0.9
79.6
29.1

Major PPT
78.1
0.63
0.9
69
41.6

Minor 5ss
30.2
-2.3
3.2
38.2
46.7

Minor BPS
58
0.23
1.7
65.8
39.6

Associated Gene:

Gene:
ACSBG2

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

230609 - 247253
16645

226475 - 247253
20779

234317 - 247253
12937