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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2446483_2446643_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2446483 - 2446643

Intron Length:
161

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACTGGT

5'SS Class:
strong_major

3'SS Sequence:
GTTTCCTGTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATGTAAA

U12 Branch Point Sequence:
GGTGATGTAAAT

Flanking Amino Acid:
EEKRMTYCHKGLSNVLDDPK

Intron Amino Acid Position:
256

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.1
0.76
1.1
76.2
39.9

Major BPS
66.4
0.41
1.1
67.7
36.5

Major PPT
77.6
0.62
1
69.5
41.6

Minor 5ss
40
-1.1
3.3
58.7
45.8

Minor BPS
42.2
-0.5
2.2
59.53
43.5

Associated Gene:

Gene:
DPP9

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2434943 - 2455123
20181

2435480 - 2455123
19644