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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2446813_2447026_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2446813 - 2447026

Intron Length:
214

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTGAGTCTG

5'SS Class:
strong_major

3'SS Sequence:
TCTGTTGCTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGATGAT

U12 Branch Point Sequence:
ATTTGGTAAAGA

Flanking Amino Acid:
CRDGGKNGFMVSPMKPLEIK

Intron Amino Acid Position:
200

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.6
0.77
0.9
70.5
41.3

Major BPS
60.7
0.27
1.2
51.5
43.9

Major PPT
74.6
0.55
0.9
69.6
36.8

Minor 5ss
32.5
-2
3
38.1
40.9

Minor BPS
41.4
-0.6
2.7
60.87
45.5

Associated Gene:

Gene:
DPP9

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2434943 - 2455123
20181

2435480 - 2455123
19644