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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2451487_2454501_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2451487 - 2454501

Intron Length:
3015

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGGTTC

5'SS Class:
strong_major

3'SS Sequence:
ACTCCTCCCTCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTTAT

U12 Branch Point Sequence:
TCTCCTTCAACT

Flanking Amino Acid:
LENETAGSWRSFLSSSEGEE

Intron Amino Acid Position:
19

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.4
0.98
0.8
83
30.4

Major BPS
78.7
0.71
1.2
71.7
44.6

Major PPT
73.2
0.52
0.8
69.8
30.2

Minor 5ss
41.3
-1
3.3
58.3
46.6

Minor BPS
67.4
0.62
1.5
81.65
39.9

Associated Gene:

Gene:
DPP9

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2434943 - 2455123
20181

2435480 - 2455123
19644