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Intron Name: Anas_platyrhynchos_platyrhynchos_29_24896_25574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24896 - 25574

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

CTTACTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

CCTGTCTTACTT

Flanking Amino Acid:

KPYMRVVTHGGYYGEGLNAI

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

71.2

0.53

37.5

Major PPT

80.4

0.68

0.8

72.5

37.5

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

51.6

0.13

1.8

66.07

45.7

Associated Gene:

Gene:

ATCAY

Ensembl Gene ID:

ENSAPLG00000004775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004927

17024 - 31995

14972