Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_2526491_2528635_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2526491 - 2528635

Intron Length:

2145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

GCTTTCCCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AATTAAATAACC

Flanking Amino Acid:

RQRLFYRGKQMEDGHSLFDY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

63.1

39.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

76.2

0.59

0.8

70.4

30.7

Minor 5ss

30.9

-2.2

3.4

42.7

44.4

Minor BPS

48.9

-0.1

66.08

38.2

Associated Gene:

Gene:

UHRF1

Ensembl Gene ID:

ENSAPLG00000014609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015294

2525829 - 2538627

12799