Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_2532617_2532703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2532617 - 2532703

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCTAA

5'SS Class:

major

3'SS Sequence:

CTTTTTGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CCTTTTTGAAAC

Flanking Amino Acid:

NSSSRRDWGKGMACVGRTKE

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

71.1

37.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.52

69.8

39.5

Minor 5ss

38.6

-1.3

2.9

47.2

48.2

Minor BPS

51.4

0.02

1.5

59.4

Associated Gene:

Gene:

UHRF1

Ensembl Gene ID:

ENSAPLG00000014609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015294

2525829 - 2538627

12799