Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_254298_256071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

254298 - 256071

Intron Length:

1774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GCCTCCCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

CCTCCCTTACAG

Flanking Amino Acid:

KILKKGTYDKAYTDELVELH

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.9

Major BPS

84.8

0.86

85.7

34.9

Major PPT

75.9

0.58

0.8

68.2

32.1

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

49.2

-0.2

1.9

53.73

46.8

Associated Gene:

Gene:

MLLT1

Ensembl Gene ID:

ENSAPLG00000003964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004081

253614 - 281155

27542