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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2557041_2558286_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2557041 - 2558286

Intron Length:

1246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGTTAG

5'SS Class:

major

3'SS Sequence:

GTGTTCTTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

GCATCCTTACCT

Flanking Amino Acid:

GEYRRLANSEKYCTPRHQDF

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

70.4

36.4

Major BPS

68.9

0.47

59.6

38.6

Major PPT

75.6

0.58

74.5

40.1

Minor 5ss

47.3

-0.3

2.4

57.5

41.6

Minor BPS

67.2

0.62

1.7

77.58

44.5

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823

ENSAPLT00000005202

2547879 - 2630475

82597