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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2558402_2560484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2558402 - 2560484

Intron Length:

2083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTGAATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTCTTTTGAATT

Flanking Amino Acid:

ADISGSLYDSDVEEWNIGNL

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.61

0.9

70.8

38.9

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

66.2

0.59

1.4

79.72

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823

ENSAPLT00000005202

2547879 - 2630475

82597