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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2560679_2577594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2560679 - 2577594

Intron Length:

16916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GACTTTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATGAT

U12 Branch Point Sequence:

TCTTCTCTGACT

Flanking Amino Acid:

NYLHFGEPKSWYAIPPEHGK

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

66.9

0.42

1.3

59.7

46.7

Major PPT

0.38

0.9

58.7

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

66.6

0.6

1.6

83.72

37.5

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823

ENSAPLT00000005202

2547879 - 2630475

82597