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Intron Name: Anas_platyrhynchos_platyrhynchos_29_25761_26580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25761 - 26580

Intron Length:

820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAG

U12 Branch Point Sequence:

TACACGTTATTA

Flanking Amino Acid:

LGNGNELEWEDDTPVATAKN

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.5

36.7

Major BPS

60.8

0.27

1.6

60.1

46.3

Major PPT

81.7

0.71

0.7

76.1

32.5

Minor 5ss

29.1

-2.4

3.4

38.8

46.3

Minor BPS

45.5

-0.3

2.2

56.86

42.8

Associated Gene:

Gene:

ATCAY

Ensembl Gene ID:

ENSAPLG00000004775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004927

17024 - 31995

14972