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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2577645_2578454_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2577645 - 2578454

Intron Length:

810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TGGCTTTACAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTTGGCTTTACA

Flanking Amino Acid:

HGKRLERLAKVPASAAENPV

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

58.5

0.19

1.1

59.4

40.1

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

56.2

0.19

2.2

75.18

42.3

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019501

2554653 - 2630475

75823