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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2577645_2580823_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2577645 - 2580823

Intron Length:

3179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

AATGTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CACTCCAGAACT

Flanking Amino Acid:

HGKRLERLAKGFFPGSSQGC

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

69.7

0.44

0.9

62.1

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

54.5

0.22

1.8

71.21

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000005202

2547879 - 2630475

82597