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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2578542_2580823_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2578542 - 2580823

Intron Length:

2282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAACG

5'SS Class:

major

3'SS Sequence:

AATGTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CACTCCAGAACT

Flanking Amino Acid:

RSPCKLPLALGFFPGSSQGC

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

0.9

66.9

38.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

69.7

0.44

0.9

62.1

Minor 5ss

28.5

-2.5

2.7

29.9

36.3

Minor BPS

54.5

0.22

1.8

71.21

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019501

2554653 - 2630475

75823