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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2585411_2599189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2585411 - 2599189

Intron Length:

13779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGTC

5'SS Class:

major

3'SS Sequence:

AAATCTCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

GTGTCTGGAAAT

Flanking Amino Acid:

WIDYGKMATQCTCRKDMVKI

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

75.1

34.8

Major BPS

0.72

38.9

Major PPT

73.9

0.54

0.9

66.7

39.4

Minor 5ss

37.6

-1.4

3.6

51.8

39.7

Minor BPS

46.3

-0.2

2.2

66.73

43.8

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823

ENSAPLT00000005202

2547879 - 2630475

82597