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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2599911_2603996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2599911 - 2603996

Intron Length:

4086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGTGAC

5'SS Class:

major

3'SS Sequence:

TGTACACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTATGTCAAAT

Flanking Amino Acid:

IGDEEEDNKHRSHRKRSQPR

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

68.8

36.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

69.5

0.44

0.9

59.6

41.8

Minor 5ss

39.6

-1.2

3.1

52.3

Minor BPS

47.3

-0.1

2.3

74.03

42.5

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005202

2547879 - 2630475

82597

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823