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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2609816_2611081_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2609816 - 2611081

Intron Length:

1266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAT

U12 Branch Point Sequence:

TGGTTTGTTACA

Flanking Amino Acid:

EAGNTEIATETAAFSKMKME

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.4

32.7

Major BPS

64.5

0.36

1.2

72.7

34.4

Major PPT

78.4

0.64

72.2

42.7

Minor 5ss

29.8

-2.3

3.1

40.6

45.6

Minor BPS

45.2

-0.3

2.2

58.61

41.4

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005202

2547879 - 2630475

82597

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823