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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2614615_2615782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2614615 - 2615782

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTCTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

AGATTCTTACGA

Flanking Amino Acid:

VCTLFYPYNQSLQVDKEAAP

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

77.7

31.1

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

78.1

0.63

0.9

83.4

25.4

Minor 5ss

41.5

-0.9

2.7

54.2

42.9

Minor BPS

48.9

-0

1.9

58.77

40.9

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823

ENSAPLT00000005202

2547879 - 2630475

82597