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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2618790_2623894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2618790 - 2623894

Intron Length:

5105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ACTTGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

ATAATGCTAACT

Flanking Amino Acid:

SAIPEQRWKLKCVYCRKRMK

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

74.9

36.2

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

76.9

0.61

73.1

41.5

Minor 5ss

43.5

-0.7

3.1

57.4

41.8

Minor BPS

-0.2

2.3

68.58

41.8

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823

ENSAPLT00000005202

2547879 - 2630475

82597