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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2624376_2625150_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2624376 - 2625150

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

TGTCTGTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

GCTGTCTGACCT

Flanking Amino Acid:

SDNVYPESIISRDCIQMGPP

Intron Amino Acid Position:

994

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

61.8

42.9

Major BPS

63.7

0.34

1.2

41.8

Major PPT

0.58

0.9

73.1

37.3

Minor 5ss

42.3

-0.9

2.9

58.1

40.7

Minor BPS

47.9

-0

1.8

64.64

45.8

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823

ENSAPLT00000005202

2547879 - 2630475

82597