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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2625271_2628274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2625271 - 2628274

Intron Length:

3004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

GCCTACTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATGTTCTTATTT

Flanking Amino Acid:

IAAQISQIYQVEFEDGSQLM

Intron Amino Acid Position:

1034

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.8

38.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

72.7

0.51

0.9

65.3

35.9

Minor 5ss

-0.8

2.9

56.9

47.4

Minor BPS

64.5

0.53

1.6

77.51

39.6

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823

ENSAPLT00000005202

2547879 - 2630475

82597