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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2628368_2630289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2628368 - 2630289

Intron Length:

1922

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTAAC

5'SS Class:

major

3'SS Sequence:

GTGTCTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTCTAATGACT

Flanking Amino Acid:

ELPKRVKSRLSLSTGAPQED

Intron Amino Acid Position:

1065

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

74.1

36.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

76.7

0.6

0.9

70.1

36.4

Minor 5ss

34.8

-1.7

41.6

39.5

Minor BPS

47.7

-0.1

1.9

70.57

40.1

Associated Gene:

Gene:

KDM4B

Ensembl Gene ID:

ENSAPLG00000005013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041886

2554653 - 2630475

75823

ENSAPLT00000019501

2554653 - 2630475

75823

ENSAPLT00000005202

2547879 - 2630475

82597