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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2653146_2653844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2653146 - 2653844

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

CCCATTGCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTTTTCATCT

Flanking Amino Acid:

GQDGPISVHCSAGVGRTGVF

Intron Amino Acid Position:

1832

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

77.6

32.8

Major BPS

100

1.24

0.5

100

Major PPT

0.38

0.9

Minor 5ss

35.6

-1.6

3.3

46.2

49.1

Minor BPS

55.2

0.24

1.8

76.37

40.5

Associated Gene:

Gene:

PTPRS

Ensembl Gene ID:

ENSAPLG00000005364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034561

2652373 - 2748559

96187

ENSAPLT00000034010

2652373 - 2748559

96187

ENSAPLT00000027381

2652373 - 2748559

96187

ENSAPLT00000005796

2652373 - 2748559

96187

ENSAPLT00000042982

2652373 - 2748559

96187