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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2654000_2655071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2654000 - 2655071

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAGCTATTAATA

Flanking Amino Acid:

LREFKVTDARDGQSRTVRQF

Intron Amino Acid Position:

1781

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

39.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

87.5

0.84

0.7

81.1

30.9

Minor 5ss

37.6

-1.4

3.4

47.1

48.3

Minor BPS

54.9

0.15

1.6

62.9

37.2

Associated Gene:

Gene:

PTPRS

Ensembl Gene ID:

ENSAPLG00000005364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005796

2652373 - 2748559

96187

ENSAPLT00000042982

2652373 - 2748559

96187

ENSAPLT00000034561

2652373 - 2748559

96187

ENSAPLT00000034010

2652373 - 2748559

96187

ENSAPLT00000027381

2652373 - 2748559

96187