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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2655198_2655275_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2655198 - 2655275

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCAAC

U12 Branch Point Sequence:

CAAGGGCTAACA

Flanking Amino Acid:

MLTKLREMGREKCHQYWPAE

Intron Amino Acid Position:

1739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

54.7

0.12

1.3

66.1

Major PPT

75.6

0.58

0.9

72.5

32.2

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

36.9

-1

2.5

45.59

43.4

Associated Gene:

Gene:

PTPRS

Ensembl Gene ID:

ENSAPLG00000005364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034010

2652373 - 2748559

96187

ENSAPLT00000027381

2652373 - 2748559

96187

ENSAPLT00000005796

2652373 - 2748559

96187

ENSAPLT00000042982

2652373 - 2748559

96187

ENSAPLT00000034561

2652373 - 2748559

96187