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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2656111_2656559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2656111 - 2656559

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGCA

5'SS Class:

major

3'SS Sequence:

CTTTTATCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTGCTTTTATCT

Flanking Amino Acid:

HVTGMELEFKRLANSKAHTS

Intron Amino Acid Position:

1637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

69.1

35.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

87.6

0.85

0.7

85.5

27.9

Minor 5ss

28.9

-2.4

3.5

38.8

46.5

Minor BPS

53.2

0.18

1.6

68.16

43.3

Associated Gene:

Gene:

PTPRS

Ensembl Gene ID:

ENSAPLG00000005364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005796

2652373 - 2748559

96187

ENSAPLT00000042982

2652373 - 2748559

96187

ENSAPLT00000034561

2652373 - 2748559

96187

ENSAPLT00000034010

2652373 - 2748559

96187

ENSAPLT00000027381

2652373 - 2748559

96187