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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2656846_2658839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2656846 - 2658839

Intron Length:

1994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGATA

5'SS Class:

major

3'SS Sequence:

CTCTACTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TCTTCCTCTACT

Flanking Amino Acid:

PDAGPIVVHCSAGVGRTGCF

Intron Amino Acid Position:

1541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

71.7

39.6

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

83.3

0.75

0.8

80.3

31.3

Minor 5ss

34.8

-1.7

3.4

48.8

Minor BPS

0.59

1.9

84.68

41.8

Associated Gene:

Gene:

PTPRS

Ensembl Gene ID:

ENSAPLG00000005364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034561

2652373 - 2748559

96187

ENSAPLT00000034010

2652373 - 2748559

96187

ENSAPLT00000027381

2652373 - 2748559

96187

ENSAPLT00000005796

2652373 - 2748559

96187

ENSAPLT00000042982

2652373 - 2748559

96187