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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2658995_2659120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2658995 - 2659120

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCACAT

U12 Branch Point Sequence:

TGCACATTACCC

Flanking Amino Acid:

FCVRTFSLHKNGSSEKREVR

Intron Amino Acid Position:

1490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

62.5

0.31

1.2

38.9

Major PPT

85.1

0.79

0.7

79.7

25.6

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

48.9

-0.1

1.9

61.15

43.6

Associated Gene:

Gene:

PTPRS

Ensembl Gene ID:

ENSAPLG00000005364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027381

2652373 - 2748559

96187

ENSAPLT00000005796

2652373 - 2748559

96187

ENSAPLT00000042982

2652373 - 2748559

96187

ENSAPLT00000034561

2652373 - 2748559

96187

ENSAPLT00000034010

2652373 - 2748559

96187