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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2677305_2677532_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2677305 - 2677532

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

TCTCACATCATT

Flanking Amino Acid:

GSPEEMDLEELVQDIARLRR

Intron Amino Acid Position:

1155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

66.8

0.42

1.1

37.7

Major PPT

81.9

0.72

0.8

73.9

36.8

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

45.3

-0.2

2.1

67.27

43.5

Associated Gene:

Gene:

PTPRS

Ensembl Gene ID:

ENSAPLG00000005364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034010

2652373 - 2748559

96187

ENSAPLT00000027381

2652373 - 2748559

96187

ENSAPLT00000005796

2652373 - 2748559

96187

ENSAPLT00000042982

2652373 - 2748559

96187

ENSAPLT00000034561

2652373 - 2748559

96187