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Intron Name: Anas_platyrhynchos_platyrhynchos_29_267908_276400_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
267908 - 276400

Intron Length:
8493

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGAATCT

5'SS Class:
major

3'SS Sequence:
GTCTTGTTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCCAA

U12 Branch Point Sequence:
TTTTCCCAAAGT

Flanking Amino Acid:
MPIEVYFKNKEEPKKVCFTY

Intron Amino Acid Position:
88

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.1
68.4
37.4

Major BPS
63.1
0.33
1.2
72.7
34.3

Major PPT
78.9
0.65
0.9
76.8
37.4

Minor 5ss
38.5
-1.3
3.5
56.9
47.4

Minor BPS
55.7
0.26
2.3
84.58
42.1

Associated Gene:

Gene:
MLLT1

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

253614 - 281155
27542