Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_2685624_2686068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2685624 - 2686068

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTGCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GTATTCTCACGT

Flanking Amino Acid:

IKDIMLADAQWETDDTAEYE

Intron Amino Acid Position:

770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

0.87

0.8

85.6

Major PPT

72.8

0.51

65.2

41.1

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

46.3

-0.2

2.1

65.31

Associated Gene:

Gene:

PTPRS

Ensembl Gene ID:

ENSAPLG00000005364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042982

2652373 - 2748559

96187