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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2711805_2714318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2711805 - 2714318

Intron Length:

2514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

TCTTCTCTCCTC

Flanking Amino Acid:

QLRSEGTPIRGGLQIESSEE

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

75.1

35.1

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

81.7

0.71

0.7

76.6

25.3

Minor 5ss

32.3

-2

3.1

41.7

Minor BPS

35.7

-1.1

3.6

57.86

42.1

Associated Gene:

Gene:

PTPRS

Ensembl Gene ID:

ENSAPLG00000005364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027381

2652373 - 2748559

96187