Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_2822905_2833821_F

Intron Information:

Intron Rank:

141461

Intron Class:

major

Intron Phase:

Intron Coordinates:

2822905 - 2833821

Intron Length:

10917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TGTTTATACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTTTATACACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

76.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.56

69.7

39.8

Minor 5ss

36.8

-1.5

2.9

52.2

44.4

Minor BPS

45.8

-0.3

2.3

64.58

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038426

2821783 - 2834867

13085