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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2866565_2867258_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2866565 - 2867258

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCGTCA

5'SS Class:

major

3'SS Sequence:

ACAAGCACCAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCACAA

U12 Branch Point Sequence:

GGTACCGAAGCT

Flanking Amino Acid:

PGQKEEEDSGSKGQHPEIPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.2

56.3

39.4

Major BPS

53.3

0.08

1.1

37.5

Major PPT

42.7

-0.4

1.6

35.8

34.3

Minor 5ss

35.7

-1.6

3.5

47.4

48.2

Minor BPS

41.9

-0.5

2.4

62.37

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021332

2865147 - 2867290

2144