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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3022747_3025166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3022747 - 3025166

Intron Length:

2420

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCACAAT

U12 Branch Point Sequence:

TTTTTCTCGAAA

Flanking Amino Acid:

KKAAEDKCKQVEDELVALQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.7

1.15

0.7

85.2

31.4

Major BPS

46.1

-0.2

1.3

50.7

39.6

Major PPT

71.7

0.49

1.1

75.4

33.6

Minor 5ss

24.8

-2.9

3.6

33.7

41.6

Minor BPS

60.5

0.32

1.7

75.49

35.3

Associated Gene:

Gene:

TPM4

Ensembl Gene ID:

ENSAPLG00000027602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021405

3022633 - 3031423

8791