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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3025293_3028006_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3025293 - 3028006

Intron Length:

2714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTACGTACC

5'SS Class:

major

3'SS Sequence:

TTATTTCACGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

AGAACCTCAATT

Flanking Amino Acid:

LEQAEKKATDAEGEVAALNR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

37.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

73.7

0.53

0.9

70.8

34.8

Minor 5ss

38.4

-1.3

51.1

38.5

Minor BPS

57.6

0.32

1.6

69.8

40.6

Associated Gene:

Gene:

TPM4

Ensembl Gene ID:

ENSAPLG00000027602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021405

3022633 - 3031423

8791