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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3029303_3029636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3029303 - 3029636

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTCT

5'SS Class:

major

3'SS Sequence:

TTTGTTTTCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAA

U12 Branch Point Sequence:

CTTCCCTTAAAG

Flanking Amino Acid:

LKSLEAQSEKYSEKEDKYEE

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

73.5

38.1

Major BPS

65.4

0.38

1.1

67.5

Major PPT

0.85

0.7

84.2

30.7

Minor 5ss

37.8

-1.4

51.1

45.4

Minor BPS

69.2

0.46

1.5

70.4

42.3

Associated Gene:

Gene:

TPM4

Ensembl Gene ID:

ENSAPLG00000027602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021765

3025394 - 3031423

6030

ENSAPLT00000021405

3022633 - 3031423

8791