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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3032367_3033161_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3032367 - 3033161

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAG

U12 Branch Point Sequence:

TTTGTGTGAGCC

Flanking Amino Acid:

LDGKRIKLQIWDTAGQERFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

45.9

-0.2

1.7

42.8

49.4

Major PPT

75.1

0.56

68.6

Minor 5ss

36.8

-1.5

3.5

53.4

44.8

Minor BPS

-0.4

2.3

62.44

43.3

Associated Gene:

Gene:

RAB8A

Ensembl Gene ID:

ENSAPLG00000008784

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009155

3031940 - 3035872

3933