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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3034396_3034951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3034396 - 3034951

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

AAGCTGTTAACC

Flanking Amino Acid:

SAKANINIENAFFTLARDIK

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

85.4

0.8

0.9

79.9

37.7

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

49.1

-0

58.99

39.8

Associated Gene:

Gene:

RAB8A

Ensembl Gene ID:

ENSAPLG00000008784

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009155

3031940 - 3035872

3933