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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3035003_3035779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3035003 - 3035779

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCATCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTAAGCATAAAT

Flanking Amino Acid:

DIKAKMDKKLEGNSPQGSNQ

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.8

79.3

28.9

Major BPS

0.62

1.4

85.7

34.9

Major PPT

81.6

0.71

0.8

78.3

35.1

Minor 5ss

30.7

-2.2

2.6

33.5

35.6

Minor BPS

48.1

-0

2.1

72.4

43.5

Associated Gene:

Gene:

RAB8A

Ensembl Gene ID:

ENSAPLG00000008784

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009155

3031940 - 3035872

3933