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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3052535_3053387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3052535 - 3053387

Intron Length:

853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGCCTG

5'SS Class:

major

3'SS Sequence:

TTTTTCTGATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

TTTTTCTGATCA

Flanking Amino Acid:

ELMSYRLNTHVKPLIWIESV

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

63.6

48.1

Major BPS

0.55

1.1

63.4

44.3

Major PPT

80.9

0.7

0.9

82.2

34.2

Minor 5ss

42.9

-0.8

3.1

55.9

41.9

Minor BPS

65.4

0.48

1.7

79.93

Associated Gene:

Gene:

AP1M1

Ensembl Gene ID:

ENSAPLG00000009067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009484

3048359 - 3056957

8599