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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3053460_3053724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3053460 - 3053724

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAAGT

5'SS Class:

major

3'SS Sequence:

TTTCCTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAG

U12 Branch Point Sequence:

TATTTAGAGACT

Flanking Amino Acid:

SHSRIEYMIKAKSQFKRRST

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.3

75.5

40.6

Major BPS

64.7

0.37

1.5

63.7

43.9

Major PPT

86.1

0.81

0.6

85.4

21.9

Minor 5ss

30.6

-2.2

2.9

41.4

44.6

Minor BPS

-0.4

2.4

68.36

42.7

Associated Gene:

Gene:

AP1M1

Ensembl Gene ID:

ENSAPLG00000009067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009484

3048359 - 3056957

8599