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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3053884_3054689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3053884 - 3054689

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTGGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACACAT

U12 Branch Point Sequence:

AAAACAACAACA

Flanking Amino Acid:

EIVWSIKSFPGGKEYLMRAH

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

61.1

0.28

29.8

Major PPT

66.8

0.38

1.2

74.9

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

42.4

-0.5

1.9

52.3

Associated Gene:

Gene:

AP1M1

Ensembl Gene ID:

ENSAPLG00000009067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009484

3048359 - 3056957

8599