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Intron Name: Anas_platyrhynchos_platyrhynchos_29_3055362_3055934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3055362 - 3055934

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTCCCCTTTACA

Flanking Amino Acid:

PWVRYITQNGDYQLRTQ*

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

72.1

40.4

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

85.2

0.79

0.7

79.4

26.1

Minor 5ss

38.9

-1.2

2.9

49.7

46.6

Minor BPS

68.9

0.59

1.6

77.23

39.3

Associated Gene:

Gene:

AP1M1

Ensembl Gene ID:

ENSAPLG00000009067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009484

3048359 - 3056957

8599