Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_3104289_3116183_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3104289 - 3116183

Intron Length:

11895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTAAACTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

TTTCCCTAAACT

Flanking Amino Acid:

NVPPRPKPPSGKSTPVSHLG

Intron Amino Acid Position:

795

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

66.1

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

72.2

0.5

61.9

43.8

Minor 5ss

31.8

-2.1

3.1

36.6

41.8

Minor BPS

77.1

0.93

1.6

93.68

34.1

Associated Gene:

Gene:

EPS15L1

Ensembl Gene ID:

ENSAPLG00000009655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035468

3099341 - 3136491

37151

ENSAPLT00000010133

3099341 - 3136491

37151