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Intron Name: Anas_platyrhynchos_platyrhynchos_29_310927_312831_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

310927 - 312831

Intron Length:

1905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTGCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAC

U12 Branch Point Sequence:

AGCTGCATGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.7

43.7

Major BPS

59.1

0.23

1.2

61.6

34.1

Major PPT

0.32

1.1

65.9

33.7

Minor 5ss

43.2

-0.7

2.9

55.9

48.3

Minor BPS

48.1

-0

2.1

67.24

43.4

Associated Gene:

Gene:

ACER1

Ensembl Gene ID:

ENSAPLG00000003845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003932

300647 - 313424

12778