Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_3118220_3119442_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3118220 - 3119442

Intron Length:

1223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTGTTCTTATTT

Flanking Amino Acid:

FTKPSTVPSKSDPFESSDPF

Intron Amino Acid Position:

703

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.8

0.65

0.9

78.2

35.4

Minor 5ss

32.8

-2

2.7

42.5

44.3

Minor BPS

0.46

1.6

74.68

43.1

Associated Gene:

Gene:

EPS15L1

Ensembl Gene ID:

ENSAPLG00000009655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035468

3099341 - 3136491

37151

ENSAPLT00000010133

3099341 - 3136491

37151